Genomic tRNA Database: Plasmodium falciparum (Oct 2007)

tRNAscan-SE Analysis of Plasmodium falciparum (Oct 2007)

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>> Genome Seq

tRNA Gene Summary



tRNAs Decoding Standard 20 AA 35
 Selenocysteine tRNAs (TCA) 0
 Possible suppressor tRNAs (CTA,TTA) 0
 tRNAs with undetermined 
 or unknown isotypes 0
 Predicted pseudogenes 0
 Total tRNAs 35
 
 
Intron Summary tRNAs with introns 
 1 Tyr 
 GTA 
 1

Four Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ala AGC 
 1 GGC 
   CGC 
 1 TGC 
 1 3
 Gly ACC 
   GCC 
   CCC 
   TCC 
 1 1
 Pro AGG 
 1 GGG 
   CGG 
 1 TGG 
 1 3
 Thr AGT 
   GGT 
   CGT 
 1 TGT 
 1 2
 Val AAC 
 1 GAC 
   CAC 
 1 TAC 
 1 3  Six Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ser AGA 
 1 GGA 
   CGA 
 1 TGA 
 1 ACT 
   GCT 
 1   
     
   4
 Arg ACG 
   GCG 
   CCG 
   TCG 
 1   
     
   CCT 
   TCT 
 1 2
 Leu AAG 
 1 GAG 
   CAG 
 1 TAG 
 1   
     
   CAA 
 1 TAA 
 1 5
 Two Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Phe AAA 
   GAA 
 1   
     
   1
 Asn ATT 
   GTT 
 1   
     
   1
 Lys   
     
   CTT 
   TTT 
   0
 Asp ATC 
   GTC 
 1   
     
   1
 Glu   
     
   CTC 
 1 TTC 
 1 2
 His ATG 
   GTG 
     
     
   0
 Gln   
     
   CTG 
 1 TTG 
 1 2  Two Box & Other tRNA Sets Isotype tRNA Count by Anticodon Total
 Ile AAT 
 1 GAT 
     
   TAT 
 1 2
 Met   
     
   CAT 
 2   
   2
 Tyr ATA 
   GTA 
 1   
     
   1
 Supres   
     
   CTA 
   TTA 
   0
 Cys ACA 
   GCA 
     
     
   0
 Trp   
     
   CCA 
     
   0
 SelCys   
     
     
   TCA 
   0

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.