Genomic tRNA Database: Drosophila melanogaster (Release 5 Apr 2006)

tRNAscan-SE Analysis of Drosophila melanogaster (Release 5 Apr 2006)

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>> Genome DB

>> Genome Seq

tRNA Gene Summary



tRNAs Decoding Standard 20 AA 298
 Selenocysteine tRNAs (TCA) 1
 Possible suppressor tRNAs (CTA,TTA) 0
 tRNAs with undetermined 
 or unknown isotypes 1
 Predicted pseudogenes 4
 Total tRNAs 304
 
 
Intron Summary tRNAs with introns 
 15 Leu 
 CAA 
 4 Ile 
 TAT 
 2 Tyr 
 GTA 
 9

Four Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ala AGC 
 12 GGC 
   CGC 
 3 TGC 
 2 17
 Gly ACC 
   GCC 
 14 CCC 
   TCC 
 6 20
 Pro AGG 
 7 GGG 
   CGG 
 5 TGG 
 5 17
 Thr AGT 
 9 GGT 
   CGT 
 3 TGT 
 6 18
 Val AAC 
 6 GAC 
   CAC 
 7 TAC 
 2 15  Six Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Ser AGA 
 8 GGA 
   CGA 
 4 TGA 
 2 ACT 
   GCT 
 6   
     
   20
 Arg ACG 
 10 GCG 
   CCG 
   TCG 
 10   
     
   CCT 
 3 TCT 
 3 26
 Leu AAG 
 5 GAG 
   CAG 
 8 TAG 
 2   
     
   CAA 
 4 TAA 
 4 23
 Two Box tRNA Sets Isotype tRNA Count by Anticodon Total
 Phe AAA 
   GAA 
 8   
     
   8
 Asn ATT 
   GTT 
 12   
     
   12
 Lys   
     
   CTT 
 13 TTT 
 6 19
 Asp ATC 
   GTC 
 14   
     
   14
 Glu   
     
   CTC 
 19 TTC 
 6 25
 His ATG 
   GTG 
 5   
     
   5
 Gln   
     
   CTG 
 8 TTG 
 4 12  Two Box & Other tRNA Sets Isotype tRNA Count by Anticodon Total
 Ile AAT 
 9 GAT 
     
   TAT 
 2 11
 Met   
     
   CAT 
 12   
   12
 Tyr ATA 
   GTA 
 9   
     
   9
 Supres   
     
   CTA 
   TTA 
   0
 Cys ACA 
   GCA 
 7   
     
   7
 Trp   
     
   CCA 
 8   
   8
 SelCys   
     
     
   TCA 
 1 1

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.