Genomic tRNA Database: Anopheles gambiae

tRNAscan-SE Analysis of Anopheles gambiae

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>> tRNAs by Isotype

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>> tRNA Alignments

>> FASTA Seqs

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>> Genome DB

>> Genome Seq

tRNA Gene Summary



tRNAs Decoding Standard 20 AA 414
 Selenocysteine tRNAs (TCA) 0
 Possible suppressor tRNAs (CTA,TTA) 0
 tRNAs with undetermined 
 or unknown isotypes 0
 Predicted pseudogenes 8
 Total tRNAs 422
 
 
Intron Summary tRNAs with introns 
 27 Leu 
 CAA 
 3 Ile 
 TAT 
 2 Tyr 
 GTA 
 22

Four Box tRNA Sets Isotype Anticodon Count Total
 Ala AGC 
 17 GGC 
   CGC 
 6 TGC 
 3 26
 Gly ACC 
   GCC 
 15 CCC 
   TCC 
 8 23
 Pro AGG 
 7 GGG 
   CGG 
 13 TGG 
 8 28
 Thr AGT 
 8 GGT 
   CGT 
 5 TGT 
 2 15
 Val AAC 
 31 GAC 
   CAC 
 29 TAC 
 3 63  Six Box tRNA Sets Isotype Anticodon Count Total
 Ser AGA 
 6 GGA 
   CGA 
 8 TGA 
 2 ACT 
   GCT 
 6   
     
   22
 Arg ACG 
 10 GCG 
   CCG 
   TCG 
 8   
     
   CCT 
 2 TCT 
 2 22
 Leu AAG 
 5 GAG 
   CAG 
 10 TAG 
 3   
     
   CAA 
 3 TAA 
 2 23
 Two Box tRNA Sets Isotype Anticodon Count Total
 Phe AAA 
   GAA 
 9   
     
   9
 Asn ATT 
   GTT 
 11   
     
   11
 Lys   
     
   CTT 
 17 TTT 
 8 25
 Asp ATC 
   GTC 
 20   
     
   20
 Glu   
     
   CTC 
 15 TTC 
 11 26
 His ATG 
   GTG 
 21   
     
   21
 Gln   
     
   CTG 
 11 TTG 
 4 15  Two Box & Other tRNA Sets Isotype Anticodon Count Total
 Ile AAT 
 12 GAT 
     
   TAT 
 2 14
 Met   
     
   CAT 
 18   
   18
 Tyr ATA 
   GTA 
 22   
     
   22
 Supres   
     
   CTA 
   TTA 
   0
 Cys ACA 
   GCA 
 5   
     
   5
 Trp   
     
   CCA 
 6   
   6
 SelCys   
     
     
   TCA 
   0

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.